Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014469.1 Corchorus capsularis cultivar CVL-1 contig14490, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31592

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12488--12650
31
5.3
31
81
8
208
38
16
20
25
1.93
12432--12652
60
3.7
60
86
7
249
36
17
19
27
1.94
12683--12908
31
7.5
31
70
16
197
26
19
20
33
1.97
12711--12873
29
5.5
28
70
17
123
26
19
20
33
1.97
12683--12904
60
3.7
60
95
1
392
25
19
20
33
1.97
12915--12965
19
2.7
19
75
19
52
39
5
0
54
1.24
20191--20237
25
2.0
25
83
8
62
14
10
23
51
1.74
24973--26265
26
49.9
26
76
12
974
33
21
13
30
1.92
24974--26265
79
16.3
81
74
13
558
33
21
13
30
1.92
25344--25379
18
2.0
18
100
0
72
33
22
11
33
1.89
24973--26268
53
24.5
53
79
10
1184
33
21
13
30
1.92
26554--26624
35
2.0
35
100
0
142
47
11
18
22
1.80

Tables:   1

The End!