Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014574.1 Corchorus capsularis cultivar CVL-1 contig14595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36919

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--3536
325
10.7
324
80
7
1700
32
15
16
36
1.89
3--1228
656
1.9
655
85
3
1689
32
15
14
37
1.88
1--4137
332
12.6
327
82
6
3648
32
14
16
36
1.89
1--4117
658
6.3
659
81
6
3873
32
14
15
36
1.89
29325--29357
11
2.8
12
81
9
50
48
3
6
42
1.43
31532--31650
62
1.9
62
96
0
220
31
13
15
40
1.85
36325--36351
7
3.9
7
100
0
54
40
0
14
44
1.46

Tables:   1

The End!