Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014591.1 Corchorus capsularis cultivar CVL-1 contig14612, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25968

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--127
21
2.1
21
86
0
61
38
9
38
13
1.77
6996--7057
33
2.0
31
87
12
92
33
12
8
45
1.72
9809--11150
199
6.8
198
85
5
1760
32
13
19
34
1.90
9809--11148
397
3.4
394
86
4
1784
32
13
19
34
1.90
9814--11150
596
2.2
593
87
5
1903
33
13
18
34
1.90
11478--11508
16
1.9
16
93
0
53
54
0
9
35
1.33
12589--12628
10
4.0
10
83
0
53
25
12
55
7
1.63
12585--12627
20
2.2
20
91
0
68
27
13
51
6
1.67
15911--16049
45
3.2
45
89
6
207
35
4
22
38
1.74
18858--18886
3
9.7
3
100
0
58
65
0
0
34
0.93
20677--20711
2
17.0
2
94
5
61
48
0
2
48
1.16

Tables:   1

The End!