Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014592.1 Corchorus capsularis cultivar CVL-1 contig14613, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13505

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
304--650
176
2.0
175
89
4
529
29
12
21
35
1.91
3--1611
381
4.3
373
81
11
1628
32
12
19
35
1.89
480--886
201
2.0
203
91
0
665
32
12
19
34
1.90
728--1064
180
1.9
176
89
4
525
35
11
16
36
1.84
581--1622
199
5.4
183
74
14
781
33
13
18
35
1.89
1152--1623
198
2.4
198
85
2
660
33
13
18
35
1.89
5988--6023
13
2.8
13
100
0
72
86
8
5
0
0.72
10465--10508
2
21.5
2
82
13
54
45
4
2
47
1.35

Tables:   1

The End!