Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014713.1 Corchorus capsularis cultivar CVL-1 contig14734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27721

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9310--9460
38
4.0
38
94
1
252
21
19
36
22
1.95
9459--9483
6
4.2
6
100
0
50
16
0
36
48
1.46
23366--23652
37
7.8
36
88
5
344
45
10
18
25
1.81
23624--24055
45
9.6
45
88
2
624
46
12
15
24
1.80
23983--24066
42
2.2
38
81
12
91
50
8
19
22
1.74
24059--24277
41
5.6
40
75
10
220
47
10
19
21
1.80
24059--24294
77
3.1
77
91
0
373
47
10
19
21
1.79
24387--24473
37
2.4
37
98
0
165
41
6
27
24
1.80
24516--24703
36
5.2
36
86
5
254
42
11
19
27
1.85
24503--24703
73
2.8
73
90
3
300
41
10
19
27
1.85

Tables:   1

The End!