Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014866.1 Corchorus capsularis cultivar CVL-1 contig14887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3127

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
639--1188
43
11.8
43
76
14
506
37
17
7
38
1.77
673--1188
142
3.6
142
92
1
809
37
17
6
38
1.77
721--1194
99
4.9
97
74
10
452
36
16
7
39
1.77
1048--1116
21
3.3
21
76
17
72
40
15
1
42
1.56
901--1194
101
2.9
101
85
6
354
37
17
6
38
1.75
1141--1216
35
2.2
35
92
0
134
36
18
7
36
1.80
1240--1406
55
3.0
55
95
0
298
26
18
5
49
1.69
2230--2460
49
4.7
49
86
2
266
35
19
5
40
1.74
2260--2460
49
4.1
49
87
4
280
36
18
4
39
1.73

Tables:   1

The End!