Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015001.1 Corchorus capsularis cultivar CVL-1 contig15022, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26343

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1536--2231
354
2.0
346
84
5
907
24
26
14
35
1.94
2828--2866
12
3.6
12
80
19
50
25
28
15
30
1.96
12493--12536
22
2.0
22
95
0
79
25
22
13
38
1.91
16622--16655
3
11.3
3
87
0
50
29
32
0
38
1.58
19266--19403
74
1.9
74
84
3
188
28
15
22
33
1.95
19472--19511
20
2.0
20
90
0
62
30
10
20
40
1.85
19805--20875
429
2.5
428
80
6
1124
42
12
12
31
1.81
21154--21195
9
4.7
9
80
19
52
11
2
7
78
1.04
25293--25330
19
2.0
19
85
10
51
18
15
39
26
1.91
25231--25720
119
4.1
119
88
0
739
16
24
26
32
1.96
25175--25720
238
2.3
238
94
2
955
16
23
28
32
1.96
25650--25687
19
2.0
19
85
10
51
13
15
44
26
1.83

Tables:   1

The End!