Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015084.1 Corchorus capsularis cultivar CVL-1 contig15105, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12891

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3788
456
8.4
454
81
8
4549
26
18
22
32
1.97
1--8463
912
9.4
912
91
3
13498
25
18
22
32
1.97
3784--8463
457
10.3
456
91
2
7461
25
18
22
33
1.97
7386--7424
17
2.3
17
82
8
53
5
23
0
71
1.05
8089--8852
389
2.0
389
88
1
1136
25
20
22
31
1.98
9259--11784
455
5.6
454
88
2
3624
26
18
22
32
1.97
9259--12845
910
4.0
908
88
4
5223
26
18
22
32
1.97
9259--12656
872
3.8
872
86
6
4181
26
18
22
32
1.97

Tables:   1

The End!