Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015165.1 Corchorus capsularis cultivar CVL-1 contig15186, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36739

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6794--6978
92
2.0
93
91
4
304
40
17
15
26
1.90
21758--21806
24
2.0
24
100
0
98
34
20
8
36
1.82
21873--21916
19
2.3
19
84
0
52
11
50
2
36
1.51
24958--25134
41
4.1
41
79
13
192
41
11
14
32
1.82
24954--25056
51
2.0
51
90
0
161
39
10
15
33
1.82
25732--25937
103
2.0
103
97
0
385
25
11
25
38
1.89
26836--26886
18
2.8
18
81
0
57
23
31
13
31
1.93
33062--33176
48
2.4
47
80
7
124
19
20
23
37
1.94
33157--33248
48
1.9
48
84
2
123
20
19
17
42
1.89
33858--33920
17
3.7
17
100
0
126
22
22
12
42
1.87
33925--36739
330
8.5
331
84
3
3435
35
16
15
33
1.90

Tables:   1

The End!