Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015179.1 Corchorus capsularis cultivar CVL-1 contig15200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30565

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225--331
53
2.0
53
96
0
196
17
18
16
46
1.84
10787--10828
19
2.2
19
95
0
75
28
2
33
35
1.70
12380--12417
19
2.0
19
100
0
76
26
10
31
31
1.90
18955--18982
2
14.0
2
100
0
56
50
0
0
50
1.00
21455--21484
2
15.0
2
100
0
60
50
0
0
50
1.00
22422--22687
133
2.0
133
100
0
532
39
12
12
36
1.81
26793--26849
23
2.5
23
82
5
71
12
33
42
12
1.80
26717--26876
80
2.0
80
87
2
232
18
29
37
15
1.91
26883--30561
326
11.3
323
83
5
4243
34
16
15
33
1.90

Tables:   1

The End!