Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015183.1 Corchorus capsularis cultivar CVL-1 contig15204, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12491

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
532--1057
264
2.0
265
88
4
796
36
15
13
34
1.87
1418--3032
325
5.0
321
84
4
1996
35
17
14
32
1.91
2833--3192
196
1.8
198
86
2
528
35
17
15
31
1.90
3031--5195
324
6.7
321
86
2
2789
34
17
15
32
1.91
2187--3842
844
2.0
844
90
1
2644
35
16
15
32
1.91
7646--10950
973
3.4
969
86
3
4374
34
17
14
32
1.91
7646--10950
326
10.2
323
86
4
4136
34
17
14
32
1.91
7630--10950
646
5.1
644
85
4
4192
34
17
14
32
1.91
10513--11449
499
1.9
498
86
3
1348
35
17
15
31
1.91
10973--12489
325
4.7
323
88
4
2123
34
16
15
33
1.90

Tables:   1

The End!