Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015255.1 Corchorus capsularis cultivar CVL-1 contig15276, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10279

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1363--1482
50
2.4
49
87
4
168
36
0
20
41
1.59
2213--2719
35
14.8
35
80
8
531
38
9
17
34
1.83
2314--2365
14
3.5
15
73
17
54
36
9
21
32
1.86
2214--2715
173
2.9
174
78
12
493
38
9
17
34
1.83
2704--2730
14
1.9
14
100
0
54
40
0
29
29
1.57
9334--9431
35
2.8
35
81
1
117
21
20
19
38
1.93
9452--9611
36
4.4
36
70
11
112
16
16
29
36
1.92
10134--10197
32
2.0
32
81
6
76
25
21
12
40
1.88

Tables:   1

The End!