Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015281.1 Corchorus capsularis cultivar CVL-1 contig15302, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7310

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
165--206
21
2.0
22
85
4
59
40
0
14
45
1.45
135--420
51
5.7
50
74
9
197
41
2
15
40
1.61
915--1479
35
16.7
34
78
11
540
38
10
18
31
1.85
910--1479
103
5.6
103
80
9
577
38
10
18
31
1.85
915--1479
238
2.4
238
83
7
713
38
10
18
31
1.85
908--1479
273
2.1
267
82
8
701
39
10
18
31
1.85
2764--3215
166
2.7
166
84
4
546
40
14
14
30
1.86
3632--3666
15
2.2
16
90
5
54
45
2
2
48
1.32
4909--4966
24
2.4
24
82
5
73
32
0
13
53
1.40
5218--5274
26
2.2
25
87
9
80
43
15
5
35
1.70
5699--5730
5
6.4
5
96
0
55
84
0
15
0
0.63
6686--6710
13
1.9
13
100
0
50
32
4
8
56
1.47
6740--6798
30
2.0
30
89
0
91
42
18
1
37
1.61

Tables:   1

The End!