Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015655.1 Corchorus capsularis cultivar CVL-1 contig15676, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25408

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6647--6691
23
2.0
23
83
8
58
40
0
2
57
1.11
9653--9793
22
6.4
22
73
11
94
39
16
9
35
1.80
9653--9745
44
2.1
44
82
4
107
40
18
8
32
1.81
10062--10165
22
4.7
22
78
2
91
32
10
13
43
1.78
10103--10185
22
3.7
23
75
12
84
39
12
9
38
1.75
10103--10202
43
2.3
45
81
6
107
36
12
10
42
1.76
16510--16988
35
13.2
35
77
11
387
37
8
17
37
1.80
16646--16693
21
2.3
21
85
0
60
47
4
12
35
1.60
16667--16986
105
3.1
103
87
5
427
35
8
17
37
1.81
16905--16961
16
3.4
16
68
13
51
42
8
14
35
1.76
23334--23383
24
2.1
24
85
3
66
32
6
6
56
1.48
24841--24934
46
2.0
48
87
4
138
37
11
13
37
1.82
25171--25202
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!