Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015971.1 Corchorus capsularis cultivar CVL-1 contig15992, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27110

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2153--2280
63
2.0
64
87
6
188
29
10
13
46
1.75
5269--5294
7
3.7
7
100
0
52
42
11
0
46
1.40
14743--14775
16
2.1
16
100
0
66
33
18
12
36
1.88
15902--15932
2
15.5
2
100
0
62
0
0
48
51
1.00
22042--22075
2
17.0
2
93
0
59
47
0
2
50
1.16
23283--23765
35
13.8
34
79
8
409
37
9
20
33
1.84
23283--23763
139
3.4
139
78
10
437
37
9
19
33
1.84
23288--23765
174
2.7
173
78
7
448
37
9
20
33
1.84

Tables:   1

The End!