Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016118.1 Corchorus capsularis cultivar CVL-1 contig16139, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4835

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
399--878
35
13.7
35
82
7
580
34
17
8
39
1.81
399--879
70
6.8
70
91
2
750
34
17
9
39
1.81
751--865
8
13.2
8
65
15
50
37
16
6
39
1.76
399--879
213
2.3
209
91
2
775
34
17
9
39
1.81
399--890
143
3.5
143
91
3
766
33
17
9
39
1.81

Tables:   1

The End!