Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016232.1 Corchorus capsularis cultivar CVL-1 contig16253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13935

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1850--3335
199
7.5
198
82
5
1744
34
17
13
33
1.90
1850--3335
400
3.7
394
84
4
1788
34
17
13
33
1.90
1862--3340
600
2.5
594
84
4
1875
34
17
13
33
1.90
6492--6525
14
2.4
14
90
9
52
47
2
8
41
1.50
9648--9682
2
17.5
2
93
0
61
48
0
51
0
1.00
11725--11787
2
31.5
2
96
0
117
49
0
50
0
1.00
13829--13928
2
50.5
2
87
2
121
44
1
50
5
1.30

Tables:   1

The End!