Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016316.1 Corchorus capsularis cultivar CVL-1 contig16337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25618

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1026--1054
14
2.1
14
100
0
58
13
27
13
44
1.82
13020--13045
10
2.6
10
100
0
52
50
19
7
23
1.73
13956--13989
12
2.7
13
90
4
52
20
11
8
58
1.59
13986--14012
6
4.5
6
100
0
54
29
0
14
55
1.40
15319--15502
36
5.2
36
88
2
259
28
23
8
39
1.84
15509--15627
36
3.3
35
82
5
112
21
16
13
47
1.81
15564--16103
37
14.0
37
83
8
607
22
17
10
48
1.79
15591--16103
78
6.6
78
85
5
664
22
18
10
48
1.79
16293--16520
83
2.8
83
86
2
302
24
17
11
46
1.81
16233--16521
41
7.1
41
81
5
300
22
18
12
46
1.82
17295--17334
20
2.1
19
86
9
55
40
5
22
32
1.76
21771--21801
6
5.3
6
96
3
55
35
0
12
51
1.40

Tables:   1

The End!