Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003342.1 Corchorus capsularis cultivar CVL-1 contig03350, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1846

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
614--1042
35
12.6
33
76
15
360
33
18
10
37
1.85
718--829
39
3.1
39
69
24
107
34
19
8
37
1.81
888--981
27
3.2
27
74
21
98
29
17
12
40
1.86
856--1047
97
2.0
98
89
3
298
31
17
12
38
1.87
930--989
27
2.2
27
90
0
93
35
15
11
38
1.83
888--1017
62
2.1
62
91
0
206
31
16
12
40
1.85
1557--1754
53
3.7
52
79
11
179
42
12
3
41
1.59
1563--1741
52
3.4
50
79
10
180
41
12
3
42
1.59

Tables:   1

The End!