Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01003635.1 Corchorus capsularis cultivar CVL-1 contig03643, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1008

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--96
20
2.0
20
85
5
53
40
15
2
42
1.60
4--311
56
5.2
57
70
19
175
37
17
6
38
1.75
91--539
43
9.8
43
83
12
558
36
17
6
38
1.77
168--354
99
1.9
99
96
0
347
36
18
7
37
1.79
125--590
142
3.3
142
96
1
855
36
18
6
38
1.77
22--539
185
2.8
184
87
3
688
37
17
6
38
1.76
310--496
99
1.9
99
94
2
331
35
18
6
38
1.78
519--564
21
2.2
21
84
0
56
39
15
2
43
1.59
495--617
56
2.2
56
89
2
185
38
18
4
38
1.73

Tables:   1

The End!