Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004239.1 Corchorus capsularis cultivar CVL-1 contig04247, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1596

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--413
35
11.5
35
82
7
464
40
11
17
30
1.85
38--413
19
21.3
18
63
22
104
39
11
17
31
1.85
115--175
31
2.0
31
86
0
86
36
9
21
32
1.86
7--413
177
2.3
175
85
5
545
40
11
17
30
1.85
1129--1596
35
13.3
35
80
10
492
39
10
17
33
1.83
1283--1354
31
2.5
27
76
20
74
37
9
19
33
1.85
1134--1596
139
3.3
139
88
4
623
39
9
17
33
1.83

Tables:   1

The End!