Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005129.1 Corchorus capsularis cultivar CVL-1 contig05147, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2189

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
597--1237
35
18.3
35
90
0
529
34
19
17
27
1.95
597--1462
70
12.2
71
84
8
555
34
20
17
27
1.95
597--1469
105
8.2
106
82
10
576
34
20
17
27
1.95
979--1285
35
8.8
35
97
0
569
32
22
16
28
1.96
1090--1469
190
2.0
191
94
0
663
31
23
16
28
1.96
1125--1440
155
2.0
155
94
0
551
31
23
16
28
1.96
1281--1469
35
5.4
35
94
0
308
31
23
15
29
1.95
1160--1405
120
2.0
120
94
0
429
32
22
16
28
1.96

Tables:   1

The End!