Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005132.1 Corchorus capsularis cultivar CVL-1 contig05150, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5970

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--319
166
1.9
169
82
6
395
45
9
11
33
1.73
433--745
141
2.2
141
91
2
506
43
10
9
36
1.72
1029--1087
30
2.0
30
89
0
91
35
3
16
44
1.65
3448--3501
27
1.9
29
88
7
85
42
12
11
33
1.79
3320--3606
158
1.8
155
87
2
430
41
9
10
37
1.73
3757--4087
141
2.4
141
91
1
522
43
9
10
36
1.72
4415--4530
57
2.1
56
82
8
137
43
6
6
43
1.58

Tables:   1

The End!