Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005154.1 Corchorus capsularis cultivar CVL-1 contig05172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16078

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1342--1383
20
2.1
20
86
0
57
14
23
19
42
1.87
3424--3453
15
1.9
16
93
6
53
40
6
6
46
1.56
3534--3581
20
2.3
21
76
16
55
45
6
6
41
1.54
9064--10955
199
9.5
198
85
1
2354
34
18
14
32
1.91
9064--10955
397
4.8
397
86
1
2385
34
18
14
32
1.91
9064--10955
596
3.2
593
84
2
2453
34
18
14
32
1.91
15814--15844
16
1.9
16
93
0
53
35
6
0
58
1.24

Tables:   1

The End!