Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005305.1 Corchorus capsularis cultivar CVL-1 contig05323, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7807

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
259--357
43
2.3
43
91
1
155
39
7
19
34
1.79
369--452
43
2.0
43
95
0
150
36
8
19
35
1.82
270--616
99
3.5
99
89
0
514
38
7
18
36
1.79
420--508
27
3.2
27
62
20
65
40
7
17
33
1.79
470--560
43
2.1
43
87
0
128
37
7
16
38
1.77
542--582
21
2.0
21
85
0
55
41
4
14
39
1.67
512--644
56
2.4
56
85
2
178
39
6
15
38
1.72
597--650
21
2.6
21
87
0
81
46
0
14
38
1.45
1699--1740
21
2.0
21
90
9
68
38
9
40
11
1.75
3082--3124
17
2.5
17
96
0
77
20
11
23
44
1.84
3241--3307
34
2.0
34
94
5
118
31
16
2
49
1.61
3248--3308
20
3.3
20
66
29
55
29
18
3
49
1.63
3290--3406
30
4.0
30
75
18
129
23
35
2
39
1.68
3311--3424
57
2.0
57
100
0
228
21
36
1
40
1.63
6780--6809
15
1.9
16
93
6
53
33
0
13
53
1.40

Tables:   1

The End!