Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005320.1 Corchorus capsularis cultivar CVL-1 contig05338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5054

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2054--2082
6
4.8
6
100
0
58
34
48
17
0
1.47
2113--2158
16
2.8
17
77
9
60
30
52
17
0
1.45
3274--3656
35
10.8
36
83
8
461
33
18
9
38
1.82
3274--3657
106
3.6
106
89
3
587
33
18
9
38
1.82
3277--3668
141
2.8
141
84
7
508
33
18
9
39
1.83

Tables:   1

The End!