Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005334.1 Corchorus capsularis cultivar CVL-1 contig05352, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6435

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--960
35
13.1
35
87
6
565
38
9
19
32
1.84
494--960
106
4.4
106
88
5
644
38
9
19
32
1.84
506--960
177
2.6
177
87
5
647
38
9
18
33
1.84
5968--6028
29
2.1
28
81
3
68
73
3
16
6
1.17
6019--6066
6
7.5
6
81
11
51
68
2
16
12
1.29
6009--6035
8
3.4
8
100
0
54
77
0
11
11
0.99
6010--6066
6
8.4
7
84
7
50
70
1
15
12
1.25
6396--6425
10
3.0
10
100
0
60
90
0
10
0
0.47

Tables:   1

The End!