Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005562.1 Corchorus capsularis cultivar CVL-1 contig05580, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4407

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
268--3284
331
9.1
329
83
3
3718
34
17
14
33
1.90
268--3284
664
4.5
658
83
5
3670
34
17
14
33
1.90
268--3284
995
3.0
994
89
2
4422
34
17
14
33
1.90
3071--3534
250
1.9
249
85
3
655
34
16
16
32
1.92
2726--3864
581
2.0
581
90
1
1784
34
17
15
33
1.91
3307--4402
331
3.3
329
85
4
1443
35
17
13
33
1.89

Tables:   1

The End!