Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005589.1 Corchorus capsularis cultivar CVL-1 contig05607, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5995

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
859--889
16
2.0
16
93
6
55
32
35
19
12
1.90
1441--1759
160
2.0
160
94
0
566
51
2
10
35
1.50
4202--5468
160
8.0
159
70
13
979
50
3
10
35
1.55
4126--5540
473
3.0
473
95
0
2523
50
4
10
34
1.57
5151--5466
159
2.0
159
93
1
535
51
2
9
36
1.47

Tables:   1

The End!