Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005995.1 Corchorus capsularis cultivar CVL-1 contig06013, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15347

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1153--1371
91
2.4
90
85
5
298
31
24
15
28
1.96
1396--1477
35
2.3
35
89
0
128
31
20
17
30
1.95
1396--1507
35
3.2
35
83
5
120
30
21
17
30
1.96
13753--13857
35
3.1
33
86
8
133
38
17
6
38
1.76
13792--13848
16
3.4
16
68
13
51
38
14
5
42
1.68
13771--13867
19
5.4
18
64
14
58
38
16
8
37
1.79
13765--13867
35
2.9
35
92
0
170
37
16
7
37
1.78
13917--14039
17
6.9
17
66
16
70
39
18
5
36
1.75
13965--14005
21
2.0
21
95
0
73
41
19
0
39
1.52
13820--14504
56
12.5
56
86
5
882
37
17
7
37
1.77
13837--14504
111
6.1
111
88
5
889
37
18
6
37
1.78
13837--14504
167
4.1
166
86
5
887
37
18
6
37
1.78
14356--14393
16
2.3
17
86
4
60
39
15
0
44
1.47

Tables:   1

The End!