Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006138.1 Corchorus capsularis cultivar CVL-1 contig06156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7615

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--1988
325
5.9
320
81
8
1879
35
17
14
33
1.89
71--1969
645
2.9
634
80
9
2069
35
17
14
33
1.89
1765--2275
264
2.0
260
83
4
652
33
18
17
30
1.94
1436--2613
594
2.0
586
83
5
1507
34
17
15
31
1.91
2026--4548
652
3.9
650
92
2
4044
35
15
15
32
1.90
2025--4548
331
7.7
330
78
8
2531
35
15
15
32
1.90
4773--7599
325
8.7
322
80
7
3049
36
16
13
33
1.89

Tables:   1

The End!