Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006184.1 Corchorus capsularis cultivar CVL-1 contig06202, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13693

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4004--4874
35
25.1
35
82
7
1046
33
16
10
38
1.84
4109--4159
25
2.0
25
88
0
75
33
15
9
41
1.80
4069--4618
71
8.1
60
70
22
212
33
16
11
39
1.84
4130--4874
106
7.1
104
86
5
896
33
16
10
38
1.84
4130--4874
141
5.3
140
89
3
966
33
16
10
38
1.84
4752--4806
19
3.1
19
74
15
62
40
14
5
40
1.69

Tables:   1

The End!