Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006424.1 Corchorus capsularis cultivar CVL-1 contig06445, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17558

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
370--405
2
18.5
2
94
5
65
50
0
0
50
1.00
1359--1432
33
2.2
33
95
0
130
21
31
1
45
1.60
1465--1630
33
4.8
35
85
9
234
33
18
19
28
1.95
1465--1630
69
2.4
69
96
0
305
33
18
19
28
1.95
6286--6429
41
3.5
41
82
2
157
40
11
20
27
1.87
6415--7038
37
16.7
36
82
9
630
45
9
20
24
1.81
7052--7223
41
4.3
41
78
10
205
44
12
19
23
1.84
7052--7223
76
2.2
81
86
6
237
44
12
19
23
1.84
7230--7328
36
2.8
36
81
9
105
51
11
11
26
1.70
7350--7784
37
11.9
36
85
8
558
38
8
30
22
1.83
7553--7613
18
3.3
18
65
13
52
42
4
32
19
1.73
7574--7632
19
3.2
19
67
13
59
35
10
33
20
1.86
7796--7947
37
4.2
36
93
4
243
39
9
21
28
1.86
7822--7978
73
2.1
74
80
8
169
45
9
20
24
1.81
9197--9355
83
1.9
83
90
0
255
26
16
18
37
1.93
12917--12952
17
2.1
18
94
5
65
11
27
2
58
1.46
13139--13182
3
14.7
3
100
0
88
65
0
0
34
0.93
13181--13213
3
11.0
3
100
0
66
33
0
33
33
1.58

Tables:   1

The End!