Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006486.1 Corchorus capsularis cultivar CVL-1 contig06507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25805

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3166--3310
33
4.4
32
84
6
121
9
26
41
22
1.84
3171--3310
66
2.1
65
81
7
158
8
27
42
21
1.81
9582--9664
42
2.0
42
82
0
103
26
43
25
4
1.74
14045--14109
33
2.0
33
87
0
94
23
9
21
46
1.80
14128--14243
33
3.5
33
96
0
205
29
9
17
43
1.80
15911--16402
35
14.1
34
83
9
561
32
17
9
40
1.83
16008--16066
18
3.4
18
65
15
52
28
22
10
38
1.86
15911--16384
206
2.3
209
88
5
701
32
17
10
39
1.83
15911--16402
140
3.5
139
85
6
633
32
17
9
40
1.83
16113--16505
35
10.6
40
80
11
232
32
18
8
39
1.82
24984--25032
21
2.3
21
82
6
55
14
28
16
40
1.87

Tables:   1

The End!