Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006588.1 Corchorus capsularis cultivar CVL-1 contig06609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1868

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--1075
154
6.9
154
88
2
1515
24
18
16
40
1.91
2--1868
463
4.1
462
84
5
2520
24
18
16
40
1.91
944--1205
130
2.0
130
90
0
416
21
20
18
39
1.93
1074--1868
154
5.1
155
87
5
1135
25
18
16
39
1.91
1084--1866
311
2.5
306
87
5
1112
25
18
16
39
1.91

Tables:   1

The End!