Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006678.1 Corchorus capsularis cultivar CVL-1 contig06699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21709

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--2383
657
2.8
652
84
4
2264
32
14
15
37
1.88
554--2383
331
5.6
329
77
9
1618
33
14
15
36
1.88
2375--2406
2
16.5
2
93
6
57
46
0
0
53
1.00
4064--4101
18
2.1
19
90
5
60
42
26
5
26
1.76
9533--9979
202
2.2
202
98
0
867
27
18
20
32
1.96
13285--13328
20
2.2
20
100
0
88
40
15
13
29
1.86

Tables:   1

The End!