Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006706.1 Corchorus capsularis cultivar CVL-1 contig06727, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3124

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--3117
41
76.1
39
70
16
1468
14
26
21
36
1.92
76--1205
163
7.0
163
86
4
1274
14
26
22
36
1.93
511--585
35
2.1
36
87
2
107
10
28
25
36
1.89
804--3118
87
28.2
79
70
16
389
14
26
21
37
1.92
1082--1236
46
3.5
45
70
16
126
18
30
18
33
1.94
717--1278
87
6.7
86
71
12
340
15
27
20
36
1.93
1254--1362
35
2.9
36
82
9
121
12
30
22
34
1.91
1155--2170
163
6.2
163
86
3
1260
13
27
21
37
1.91
2201--2645
163
2.7
161
84
4
543
15
26
21
35
1.94

Tables:   1

The End!