Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006731.1 Corchorus capsularis cultivar CVL-1 contig06752, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3113

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3112
56
58.2
55
73
12
1615
47
5
20
27
1.70
25--3087
158
19.1
158
73
13
1565
47
5
19
27
1.71
129--2677
317
7.9
313
78
9
1978
47
5
20
27
1.70
129--2526
536
4.5
532
78
10
1927
47
4
20
27
1.70
238--2800
645
4.0
643
81
8
2473
47
5
20
27
1.70
2608--2697
48
1.9
47
90
4
146
45
6
21
26
1.76
2386--2967
266
2.2
265
89
2
876
47
6
19
27
1.72
1--3112
109
29.1
106
76
12
1855
47
5
20
27
1.70

Tables:   1

The End!