Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006747.1 Corchorus capsularis cultivar CVL-1 contig06768, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17105

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--45
6
7.8
6
92
5
67
84
13
2
0
0.72
6182--6264
41
2.0
41
90
4
132
27
9
14
48
1.75
5967--6489
277
1.9
278
95
1
951
27
10
17
44
1.81
8077--8158
16
5.1
16
80
0
92
53
29
12
4
1.58
9155--9214
21
2.9
21
94
0
102
35
16
18
30
1.93
11498--17102
941
6.0
937
93
3
9574
34
22
15
28
1.94

Tables:   1

The End!