Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006961.1 Corchorus capsularis cultivar CVL-1 contig06982, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12848

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2848--2915
30
2.3
29
79
5
73
41
7
13
38
1.72
2891--3007
45
2.7
44
89
6
168
45
7
15
31
1.74
5657--5917
35
7.7
35
83
8
299
38
8
19
33
1.81
5657--5917
66
3.9
65
80
11
262
38
8
19
33
1.81
5657--5917
101
2.5
101
93
3
432
38
8
19
33
1.81
6939--7131
100
1.9
100
90
0
305
26
13
22
37
1.91

Tables:   1

The End!