Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006991.1 Corchorus capsularis cultivar CVL-1 contig07012, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8233

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
439--470
16
1.9
17
93
6
57
21
12
21
43
1.86
866--911
20
2.2
22
88
7
69
45
21
19
13
1.84
3584--3731
41
3.6
41
89
3
210
42
10
16
31
1.81
3721--4328
37
16.3
36
79
8
569
46
7
19
26
1.77
3705--4328
74
8.4
74
84
3
670
45
7
20
26
1.77
3721--4328
111
5.4
111
81
4
659
46
7
19
26
1.77
4318--4573
41
6.3
40
92
4
397
48
10
19
21
1.78
4318--4574
81
3.2
80
93
2
415
49
10
19
21
1.77
4581--5013
37
11.8
37
85
5
558
40
6
27
25
1.81
4821--4918
19
5.3
19
61
22
55
41
4
28
25
1.73
5030--5165
36
3.8
36
88
2
193
41
9
20
27
1.83
5863--6020
78
2.0
78
95
0
280
33
12
18
35
1.88

Tables:   1

The End!