Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007226.1 Corchorus capsularis cultivar CVL-1 contig07247, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22644

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1834--1870
18
2.1
18
100
0
74
0
27
0
72
0.84
11501--15626
334
12.6
330
74
11
2689
33
14
15
36
1.88
12816--15623
314
8.7
317
72
12
1536
33
14
15
36
1.88
20373--22644
323
7.2
321
84
5
2660
35
17
14
32
1.91
20373--22644
643
3.6
638
84
4
2695
35
17
14
32
1.91

Tables:   1

The End!