Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007227.1 Corchorus capsularis cultivar CVL-1 contig07248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7495

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
424--455
15
2.1
15
100
0
64
28
15
25
31
1.96
452--1524
324
3.3
323
90
2
1692
35
16
15
32
1.90
3423--7495
321
12.7
321
86
4
5520
35
16
14
33
1.89
3423--5885
324
7.6
324
88
3
3644
35
16
14
32
1.89
5884--7495
323
5.0
322
86
3
2154
35
16
14
33
1.89

Tables:   1

The End!