Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007242.1 Corchorus capsularis cultivar CVL-1 contig07263, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23651

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3323
159
20.9
158
84
2
3952
28
22
21
27
1.99
1--3323
477
7.0
477
89
1
4839
28
22
21
27
1.99
6513--6548
2
18.0
2
100
0
72
0
0
50
50
1.00
6860--7076
108
2.0
108
100
0
434
41
22
7
29
1.81
8207--8265
21
2.8
21
66
19
50
30
11
23
33
1.91
10468--10501
16
2.1
16
89
10
52
23
0
29
47
1.52
14903--14928
13
2.0
13
100
0
52
15
23
7
53
1.67
19678--23651
159
25.0
158
85
2
4963
27
21
22
28
1.99

Tables:   1

The End!