Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007304.1 Corchorus capsularis cultivar CVL-1 contig07325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11939

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4563--4592
5
5.8
5
92
7
51
80
0
0
20
0.72
5858--7241
35
40.4
34
84
9
1522
32
17
10
40
1.83
5860--7219
66
20.0
66
82
10
1371
32
16
10
40
1.83
6709--6779
31
2.5
27
81
16
97
33
15
11
39
1.83
6882--6952
31
2.5
27
75
16
70
32
15
11
40
1.83
10419--10488
35
2.0
35
91
2
115
44
25
8
21
1.80
10506--10619
35
3.2
34
74
7
120
39
29
14
16
1.88
10521--10639
36
3.3
36
72
6
116
40
28
12
18
1.87
10463--10700
71
3.3
71
80
4
239
39
27
15
18
1.90
10831--10975
64
2.3
63
82
10
170
31
22
22
24
1.99

Tables:   1

The End!