Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007531.1 Corchorus capsularis cultivar CVL-1 contig07552, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3607

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
974--1011
18
2.1
19
90
5
60
28
13
39
18
1.88
1781--1931
36
4.2
36
90
2
223
28
21
10
39
1.87
2024--2082
19
3.2
19
67
13
59
20
33
10
35
1.86
1954--2166
69
3.0
69
88
3
291
22
28
8
40
1.84
1943--2170
37
6.3
37
88
5
315
21
29
8
40
1.83
2322--2604
76
3.7
76
96
0
523
25
20
10
44
1.83
2277--2604
41
8.5
40
76
12
346
24
20
10
44
1.83
2617--2919
37
7.9
37
75
13
190
25
20
10
43
1.83
2893--3119
71
3.2
71
90
2
348
24
22
9
43
1.82

Tables:   1

The End!