Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007536.1 Corchorus capsularis cultivar CVL-1 contig07557, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6941

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5397--5714
35
9.3
35
83
7
386
34
18
8
38
1.82
5435--6351
35
27.6
31
74
16
647
34
18
8
38
1.82
5511--5566
17
3.2
17
73
14
51
41
12
8
37
1.74
5567--5620
14
3.6
14
79
13
63
33
22
9
35
1.86
5650--5735
21
4.3
19
77
14
84
37
16
8
38
1.78
5449--5840
126
3.0
126
91
4
590
36
17
8
37
1.80
5636--5805
91
1.9
91
86
2
243
37
17
7
37
1.79

Tables:   1

The End!