Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007588.1 Corchorus capsularis cultivar CVL-1 contig07609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8831

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
249--3785
336
10.6
330
78
7
3330
32
14
15
37
1.88
4685--4722
18
2.1
19
90
5
60
26
5
26
42
1.76
4914--4942
13
2.1
14
93
6
51
27
0
13
58
1.36
4909--4951
23
1.9
22
95
4
77
30
0
11
58
1.34
5098--8831
332
11.3
329
79
7
3585
32
14
15
38
1.87
6568--6592
13
1.9
13
100
0
50
16
0
16
68
1.22
5108--8831
667
5.6
659
85
6
3966
31
14
15
38
1.88

Tables:   1

The End!