Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007677.1 Corchorus capsularis cultivar CVL-1 contig07698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8699

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
499--533
17
2.1
17
88
0
52
20
14
20
45
1.85
2202--2269
24
2.8
24
82
4
75
16
32
26
25
1.96
5521--5751
41
5.6
41
84
3
284
45
13
16
23
1.83
5522--6175
73
8.5
81
77
11
295
46
10
17
24
1.79
5522--5751
124
1.9
124
85
1
318
46
13
16
23
1.83
5755--6174
37
11.3
37
84
4
463
47
8
18
25
1.77
5755--6174
74
5.7
73
85
3
527
47
8
18
25
1.77
5537--6175
37
16.6
39
74
13
304
46
9
17
25
1.79
6159--6332
78
2.2
78
92
0
285
47
10
19
22
1.79
6159--6360
37
5.2
41
83
9
239
47
9
19
23
1.79
6196--6382
37
4.8
37
78
16
134
44
9
20
24
1.81
6159--6353
78
2.5
75
90
3
257
47
10
19
23
1.80
6376--6525
36
4.2
36
85
1
169
39
10
20
30
1.85
6371--6525
72
2.2
73
84
8
210
39
9
21
29
1.85
8248--8283
6
5.7
6
90
9
54
80
0
16
2
0.83

Tables:   1

The End!