Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007782.1 Corchorus capsularis cultivar CVL-1 contig07803, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5590

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--1977
667
2.9
658
87
4
2803
34
17
14
33
1.91
26--1977
333
5.9
331
89
2
2837
34
17
14
33
1.91
1785--2170
193
2.0
193
100
0
772
29
20
15
34
1.93
1978--5349
332
10.2
333
88
3
4872
34
18
14
32
1.91
1980--5573
992
3.7
989
89
4
5153
34
18
14
32
1.91

Tables:   1

The End!